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Fig. 2 | Tropical Medicine and Health

Fig. 2

From: Spatiotemporal analysis of tropical disease research combining Europe PMC and affiliation mapping web services

Fig. 2

The searchPublications_and_MapAffil workflow. The Taverna workflow searchPublications_and_MapAffil combining the Europe PMC searchPublications web service with the MapAffil geoparser to map publications in Europe PMC on a given topic. The innermost workflow is embedded for the looping construct in Taverna in order to retrieve all searchPublication results pages, pageSize = 100 records as a time for MapAffil. The cursorMarks were introduced in version 4.5.3 of the web services to robustly handle multiple results pages. Older workflows with offsets [13] no longer work with these services. The workflow is available on myExperiment (http://myexperiment.org/workflows/4981.html)

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